Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb1P63158 Gm42455-201ENSMUST00000199761 2736 ntBASIC8.02□□□□□ -1.12
Hmgb1P63158 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.02□□□□□ -1.12
Hmgb1P63158 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm37132-201ENSMUST00000195553 2238 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Mir669e-201ENSMUST00000117003 119 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm8662-201ENSMUST00000118644 574 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm13521-201ENSMUST00000118922 866 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 BC002163-201ENSMUST00000121906 319 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm21182-201ENSMUST00000178899 794 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm27156-201ENSMUST00000184589 754 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm4545-201ENSMUST00000190797 603 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm29815-201ENSMUST00000202418 178 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm43313-201ENSMUST00000201398 2235 ntBASIC8.02□□□□□ -1.13
Hmgb1P63158 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb1P63158 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm25167-201ENSMUST00000104188 120 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm14885-201ENSMUST00000117969 496 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm12754-201ENSMUST00000121908 454 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm4835-201ENSMUST00000155839 972 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm23822-201ENSMUST00000158739 128 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm19815-201ENSMUST00000175818 335 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm29355-201ENSMUST00000188178 697 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm28953-201ENSMUST00000188336 697 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm20788-201ENSMUST00000190538 697 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.01□□□□□ -1.13
Hmgb1P63158 AC137678.1-201ENSMUST00000198370 118 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm5284-201ENSMUST00000199053 903 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm4605-201ENSMUST00000203148 625 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm8703-201ENSMUST00000203793 730 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm44539-201ENSMUST00000206010 238 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm44566-201ENSMUST00000207638 304 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm45446-201ENSMUST00000209348 216 ntBASIC8.01□□□□□ -1.13
Hmgb1P63158 Gm5948-201ENSMUST00000219627 839 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms