Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.1□□□□□ -1.27
Atxn1P54254 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.1□□□□□ -1.27
Atxn1P54254 Gm6990-201ENSMUST00000086830 348 ntBASIC7.1□□□□□ -1.27
Atxn1P54254 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.1□□□□□ -1.27
Atxn1P54254 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.1□□□□□ -1.27
Atxn1P54254 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.1□□□□□ -1.27
Atxn1P54254 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.1□□□□□ -1.27
Atxn1P54254 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Atxn1P54254 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Atxn1P54254 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Atxn1P54254 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.1□□□□□ -1.27
Atxn1P54254 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Atxn1P54254 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Atxn1P54254 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm22882-201ENSMUST00000157749 124 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Gm3208-201ENSMUST00000168281 427 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.09□□□□□ -1.27
Atxn1P54254 Gm8241-201ENSMUST00000189286 816 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm8101-201ENSMUST00000192796 478 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.09□□□□□ -1.27
Atxn1P54254 Gm43377-201ENSMUST00000201640 455 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Gm19154-201ENSMUST00000223330 940 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Atxn1P54254 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Atxn1P54254 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.09□□□□□ -1.27
Atxn1P54254 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Atxn1P54254 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Atxn1P54254 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.09□□□□□ -1.28
Atxn1P54254 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
Atxn1P54254 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Atxn1P54254 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.09□□□□□ -1.28
Atxn1P54254 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
Atxn1P54254 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Atxn1P54254 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.08□□□□□ -1.28
Atxn1P54254 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms