Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 AC165260.6-205ENSMUST00000224190 9762 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC7.79□□□□□ -1.16
Sox1P53783 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC7.79□□□□□ -1.16
Sox1P53783 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sox1P53783 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sox1P53783 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Gm43311-201ENSMUST00000200016 2377 ntBASIC7.78□□□□□ -1.16
Sox1P53783 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm37139-201ENSMUST00000192134 4419 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 AC154227.2-201ENSMUST00000228677 2101 ntBASIC7.78□□□□□ -1.16
Sox1P53783 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Gm14824-201ENSMUST00000119421 737 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm14989-201ENSMUST00000120497 207 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm14800-201ENSMUST00000122084 1272 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Rpl37rt-202ENSMUST00000124641 294 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC7.78□□□□□ -1.16
Sox1P53783 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.78□□□□□ -1.16
Sox1P53783 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm24768-201ENSMUST00000158512 94 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC7.78□□□□□ -1.16
Sox1P53783 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.78□□□□□ -1.16
Sox1P53783 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm26455-201ENSMUST00000175300 92 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm5946-201ENSMUST00000182340 970 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm27653-201ENSMUST00000185037 136 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm7341-201ENSMUST00000192183 926 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm37196-201ENSMUST00000194762 906 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm42424-201ENSMUST00000198319 376 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm20948-201ENSMUST00000211091 449 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm32300-201ENSMUST00000221735 515 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC162857.1-201ENSMUST00000226614 400 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.78□□□□□ -1.16
Sox1P53783 AC154738.2-201ENSMUST00000227403 1110 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC7.78□□□□□ -1.16
Sox1P53783 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Gm44423-201ENSMUST00000203746 3158 ntBASIC7.78□□□□□ -1.16
Sox1P53783 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sox1P53783 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.78□□□□□ -1.16
Sox1P53783 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Sox1P53783 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sox1P53783 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Sox1P53783 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms