Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm29273-201ENSMUST00000188880 262 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm29745-201ENSMUST00000198005 687 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm42857-201ENSMUST00000200823 339 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC8.76□□□□□ -1.01
Rfx1P48377 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 AC132384.13-201ENSMUST00000219556 1159 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Gm6841-201ENSMUST00000220602 598 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 AC192616.1-201ENSMUST00000221922 132 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 AC125464.1-201ENSMUST00000228013 512 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.76□□□□□ -1.01
Rfx1P48377 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Rfx1P48377 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.76□□□□□ -1.01
Rfx1P48377 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rfx1P48377 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Rfx1P48377 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC8.75□□□□□ -1.01
Rfx1P48377 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.75□□□□□ -1.01
Rfx1P48377 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm11343-201ENSMUST00000120579 599 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC8.75□□□□□ -1.01
Rfx1P48377 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm24754-201ENSMUST00000177997 107 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm8870-201ENSMUST00000188170 775 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm29739-201ENSMUST00000191760 529 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm37884-201ENSMUST00000191857 818 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm38213-201ENSMUST00000193203 173 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm43390-201ENSMUST00000196614 421 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm44088-201ENSMUST00000204595 237 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm20948-201ENSMUST00000211091 449 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.75□□□□□ -1.01
Rfx1P48377 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Rfx1P48377 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Rfx1P48377 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm38387-201ENSMUST00000191945 2577 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.75□□□□□ -1.01
Rfx1P48377 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
Rfx1P48377 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms