Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC159263.3-201ENSMUST00000223434 460 ntBASIC8.03□□□□□ -1.12
Sox18P43680 AC122295.1-201ENSMUST00000223476 388 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC8.03□□□□□ -1.12
Sox18P43680 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.03□□□□□ -1.12
Sox18P43680 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Gm9845-201ENSMUST00000056409 598 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Sox18P43680 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Sox18P43680 Gm25512-201ENSMUST00000083863 107 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Sox18P43680 Gm38012-201ENSMUST00000193022 3029 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Gm10101-202ENSMUST00000181311 2919 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Sox18P43680 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Gm28187-201ENSMUST00000186885 2134 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Sox18P43680 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Mef2c-218ENSMUST00000198199 2589 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Gm37039-201ENSMUST00000193733 2485 ntBASIC8.03□□□□□ -1.12
Sox18P43680 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Sox18P43680 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Sox18P43680 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox18P43680 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Sox18P43680 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Sox18P43680 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Sox18P43680 Hrh1-204ENSMUST00000161220 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Sox18P43680 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Sox18P43680 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Sox18P43680 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Sox18P43680 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC8.02□□□□□ -1.13
Sox18P43680 Scel-202ENSMUST00000227322 2443 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Sox18P43680 C6-201ENSMUST00000022788 2447 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Snx32-201ENSMUST00000070172 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Gm37522-201ENSMUST00000195437 2884 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm42728-201ENSMUST00000202644 1552 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Sox18P43680 4930425K24Rik-201ENSMUST00000222054 2143 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Grm3-201ENSMUST00000004076 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Gapdhs-201ENSMUST00000074758 1368 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm5134-201ENSMUST00000099577 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox18P43680 Gm13878-201ENSMUST00000117986 577 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm11997-201ENSMUST00000118697 313 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm14678-201ENSMUST00000121396 482 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm25559-201ENSMUST00000157182 74 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm22491-201ENSMUST00000157190 102 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm22202-201ENSMUST00000158608 311 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm5929-201ENSMUST00000166883 487 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm3454-201ENSMUST00000185571 412 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm37282-201ENSMUST00000191987 164 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm37665-201ENSMUST00000192353 149 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm43835-201ENSMUST00000195932 149 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Igkv15-97-201ENSMUST00000197637 339 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm43535-201ENSMUST00000197846 164 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm42861-201ENSMUST00000199596 634 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm44379-201ENSMUST00000204501 164 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm44268-201ENSMUST00000204814 164 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm45213-201ENSMUST00000206065 304 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox18P43680 AC158803.2-201ENSMUST00000219452 679 ntBASIC8.02□□□□□ -1.13
Sox18P43680 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.02□□□□□ -1.13
Sox18P43680 Gm18601-201ENSMUST00000220831 634 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.02□□□□□ -1.13
Sox18P43680 Gm21941-201ENSMUST00000221121 562 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms