Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Mir503-201ENSMUST00000102168 71 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm26016-201ENSMUST00000104403 129 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm11581-201ENSMUST00000122024 763 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm13237-201ENSMUST00000122151 635 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm18709-201ENSMUST00000180564 489 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Pea15b-201ENSMUST00000182806 387 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm27684-201ENSMUST00000183778 80 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm6472-202ENSMUST00000187973 582 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm29470-201ENSMUST00000188007 696 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm28443-201ENSMUST00000189081 698 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm29369-201ENSMUST00000190674 615 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm37977-201ENSMUST00000193096 721 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm42883-201ENSMUST00000202594 222 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm2221-201ENSMUST00000209342 418 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm18781-201ENSMUST00000211252 924 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Tnfsf4P43488 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Tnfsf4P43488 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.54□□□□□ -1.36
Tnfsf4P43488 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm22774-201ENSMUST00000102084 109 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm26416-201ENSMUST00000104280 134 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm7129-201ENSMUST00000117402 997 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm8534-201ENSMUST00000118553 766 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm16284-201ENSMUST00000140995 400 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm25717-201ENSMUST00000158631 353 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm28801-201ENSMUST00000188761 449 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm43160-201ENSMUST00000196453 421 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm17950-201ENSMUST00000214617 646 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 AC129017.2-201ENSMUST00000226118 1284 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms