Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.19□□□□□ -1.26
Cxcl12P40224 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Cxcl12P40224 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Cxcl12P40224 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.19□□□□□ -1.26
Cxcl12P40224 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cxcl12P40224 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Cxcl12P40224 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Cxcl12P40224 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm5401-201ENSMUST00000122444 365 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm9428-201ENSMUST00000127214 769 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm22655-201ENSMUST00000174949 96 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Mir7220-201ENSMUST00000183978 60 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm18849-201ENSMUST00000189861 560 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm3351-201ENSMUST00000193454 505 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm46203-201ENSMUST00000218130 478 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm22865-201ENSMUST00000083949 214 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm10205-201ENSMUST00000087431 234 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.18□□□□□ -1.26
Cxcl12P40224 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.18□□□□□ -1.26
Cxcl12P40224 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Cxcl12P40224 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cxcl12P40224 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Cxcl12P40224 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Cxcl12P40224 Snora35-201ENSMUST00000104579 128 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm13578-201ENSMUST00000120849 590 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm13462-201ENSMUST00000121472 961 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cxcl12P40224 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.17□□□□□ -1.26
Cxcl12P40224 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms