Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Gm24519-201ENSMUST00000104507 132 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm8812-201ENSMUST00000118496 412 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm13877-201ENSMUST00000120614 417 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm14489-201ENSMUST00000120868 901 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Gm24300-201ENSMUST00000177809 109 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm24017-201ENSMUST00000178726 109 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm23952-201ENSMUST00000179380 109 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm27360-201ENSMUST00000183487 80 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm29156-201ENSMUST00000187764 499 ntBASIC8.13□□□□□ -1.11
Traf1P39428 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.13□□□□□ -1.11
Traf1P39428 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Gm36758-201ENSMUST00000222594 310 ntBASIC8.13□□□□□ -1.11
Traf1P39428 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Gm2754-201ENSMUST00000223383 589 ntBASIC8.13□□□□□ -1.11
Traf1P39428 AC154461.5-201ENSMUST00000225429 774 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC8.13□□□□□ -1.11
Traf1P39428 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.13□□□□□ -1.11
Traf1P39428 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Traf1P39428 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.13□□□□□ -1.11
Traf1P39428 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Traf1P39428 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.12□□□□□ -1.11
Traf1P39428 AC124183.1-201ENSMUST00000222367 2135 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.12□□□□□ -1.11
Traf1P39428 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Traf1P39428 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Gm22781-201ENSMUST00000104083 137 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Gm25724-201ENSMUST00000104531 117 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Gm15310-201ENSMUST00000117891 372 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm24228-201ENSMUST00000158829 129 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm5050-201ENSMUST00000197164 775 ntBASIC8.12□□□□□ -1.11
Traf1P39428 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.12□□□□□ -1.11
Traf1P39428 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.12□□□□□ -1.11
Traf1P39428 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.12□□□□□ -1.11
Traf1P39428 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Traf1P39428 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.12□□□□□ -1.11
Traf1P39428 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Traf1P39428 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Traf1P39428 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Traf1P39428 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Traf1P39428 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Traf1P39428 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Traf1P39428 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.11□□□□□ -1.11
Traf1P39428 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Traf1P39428 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms