Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm24383-201ENSMUST00000122691 333 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Gm27507-201ENSMUST00000184199 93 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Gm44163-201ENSMUST00000205140 475 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Gm18586-201ENSMUST00000217265 518 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col2a1P28481 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col2a1P28481 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Col2a1P28481 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Col2a1P28481 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
Col2a1P28481 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Col2a1P28481 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col2a1P28481 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Col2a1P28481 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Col2a1P28481 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.78□□□□□ -1.16
Col2a1P28481 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Gm22223-201ENSMUST00000157360 125 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Gm8524-201ENSMUST00000186232 379 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Gm43762-201ENSMUST00000201521 295 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Col2a1P28481 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.78□□□□□ -1.16
Col2a1P28481 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Col2a1P28481 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
Col2a1P28481 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col2a1P28481 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.78□□□□□ -1.16
Col2a1P28481 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col2a1P28481 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Col2a1P28481 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.77□□□□□ -1.16
Col2a1P28481 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Col2a1P28481 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Col2a1P28481 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm24173-201ENSMUST00000104130 128 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Col2a1P28481 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm13265-201ENSMUST00000118090 421 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Gm15765-201ENSMUST00000118407 910 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Gm7113-201ENSMUST00000120477 958 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Gm15158-201ENSMUST00000120577 570 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.77□□□□□ -1.17
Col2a1P28481 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col2a1P28481 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm15732-201ENSMUST00000079794 480 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm22053-201ENSMUST00000083394 200 ntBASIC7.77□□□□□ -1.17
Col2a1P28481 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col2a1P28481 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col2a1P28481 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms