Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Sdc1P18828 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sdc1P18828 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sdc1P18828 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sdc1P18828 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm22900-201ENSMUST00000104538 130 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm11338-201ENSMUST00000120086 1160 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gm11901-201ENSMUST00000120412 437 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gm15786-201ENSMUST00000121079 450 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm24994-201ENSMUST00000157414 121 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gm26595-201ENSMUST00000181585 484 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Mir6934-201ENSMUST00000183965 62 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm29650-201ENSMUST00000188485 742 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm6394-201ENSMUST00000197077 477 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Gm40319-201ENSMUST00000199785 481 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm18339-201ENSMUST00000218074 888 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sdc1P18828 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 AC123665.5-201ENSMUST00000226648 1392 ntBASIC5.51□□□□□ -1.53
Sdc1P18828 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.51□□□□□ -1.53
Sdc1P18828 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sdc1P18828 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sdc1P18828 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 n-R5s90-201ENSMUST00000103968 118 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm22271-201ENSMUST00000104035 128 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm10936-201ENSMUST00000105264 252 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm11969-201ENSMUST00000118848 356 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm13024-201ENSMUST00000121756 718 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm16407-201ENSMUST00000122134 567 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm9458-201ENSMUST00000135273 727 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.5□□□□□ -1.53
Sdc1P18828 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.5□□□□□ -1.53
Sdc1P18828 Gm24063-201ENSMUST00000157491 105 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm23207-201ENSMUST00000158665 102 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Gm8550-201ENSMUST00000161621 653 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Mir3100-201ENSMUST00000174918 65 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.5□□□□□ -1.53
Sdc1P18828 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms