Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdx1P18111 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm45360-201ENSMUST00000210698 1405 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Mir678-201ENSMUST00000102114 84 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdx1P18111 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm22022-201ENSMUST00000104355 127 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm10936-201ENSMUST00000105264 252 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm11972-201ENSMUST00000118514 389 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm13858-201ENSMUST00000118862 671 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm12632-201ENSMUST00000121223 495 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm12870-201ENSMUST00000121383 1016 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC5.68□□□□□ -1.5
Cdx1P18111 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdx1P18111 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Cdx1P18111 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm18953-201ENSMUST00000175694 300 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm8192-201ENSMUST00000182196 958 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm9556-201ENSMUST00000182938 940 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Mir8099-2-201ENSMUST00000183568 127 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Mir8099-1-201ENSMUST00000184238 127 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdx1P18111 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdx1P18111 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Cdx1P18111 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm36961-201ENSMUST00000191980 132 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm18428-201ENSMUST00000194986 791 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm38840-201ENSMUST00000204716 843 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdx1P18111 Olfr471-201ENSMUST00000210091 936 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm7151-201ENSMUST00000211511 954 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 AC161537.1-202ENSMUST00000228450 868 ntBASIC5.68□□□□□ -1.5
Cdx1P18111 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdx1P18111 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdx1P18111 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdx1P18111 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdx1P18111 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdx1P18111 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Cdx1P18111 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Cdx1P18111 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
Cdx1P18111 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm22439-201ENSMUST00000104048 132 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm6491-201ENSMUST00000118273 990 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm12993-201ENSMUST00000119900 479 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm11809-201ENSMUST00000120923 950 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms