Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm15203-201ENSMUST00000117668 455 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm12642-201ENSMUST00000121098 876 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm22552-201ENSMUST00000157796 337 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm9141-201ENSMUST00000159355 1007 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm16026-205ENSMUST00000162923 641 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Pisrt1-201ENSMUST00000195532 515 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 AC120002.1-201ENSMUST00000218456 331 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm5791-201ENSMUST00000220840 489 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 AC132954.2-201ENSMUST00000222400 403 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm9315-201ENSMUST00000222696 908 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Hmgb3O54879 AC162940.1-201ENSMUST00000224745 1167 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm37891-201ENSMUST00000195585 1326 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms