Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm37984-201ENSMUST00000191641 3733 ntBASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 AC139750.1-201ENSMUST00000223962 1300 ntBASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm21542-201ENSMUST00000182307 993 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 AC163660.1-201ENSMUST00000223696 818 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Mir196a-1-201ENSMUST00000083612 102 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm5512-202ENSMUST00000220222 1522 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Grik1-209ENSMUST00000227986 2942 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 AC154141.1-201ENSMUST00000208403 4136 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm13006-201ENSMUST00000118683 214 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm15712-201ENSMUST00000120369 1156 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm12630-201ENSMUST00000121575 784 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm18447-201ENSMUST00000187501 307 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm18838-201ENSMUST00000204855 886 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 AC165292.1-201ENSMUST00000215218 620 ntBASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc180J3QNE4 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm23748-201ENSMUST00000104227 131 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm22655-201ENSMUST00000174949 96 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm3841-201ENSMUST00000191399 451 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm43501-201ENSMUST00000202513 107 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm22126-201ENSMUST00000083244 142 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 CT009757.6-201ENSMUST00000220661 2312 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Gm6866-201ENSMUST00000188559 2549 ntBASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc180J3QNE4 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Gm9658-201ENSMUST00000182757 1012 ntBASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Gm18952-201ENSMUST00000194471 846 ntBASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 AC113031.1-201ENSMUST00000227400 432 ntBASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc180J3QNE4 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc180J3QNE4 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms