Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm12174-201ENSMUST00000119853 813 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm26321-201ENSMUST00000157740 242 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Mir6357-201ENSMUST00000184246 104 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm44971-201ENSMUST00000206192 337 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm7986-201ENSMUST00000221336 551 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 AV026068-219ENSMUST00000224148 933 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Cdc40Q9DC48 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm25311-201ENSMUST00000104136 132 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm8812-201ENSMUST00000118496 412 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm11903-201ENSMUST00000118958 727 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm15007-201ENSMUST00000119982 710 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm7746-201ENSMUST00000120966 503 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm11257-201ENSMUST00000121313 315 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm26025-201ENSMUST00000158655 271 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm24682-201ENSMUST00000158764 137 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Mir199b-201ENSMUST00000175066 110 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm23164-201ENSMUST00000175084 111 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Mir8105-201ENSMUST00000184718 89 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm27972-201ENSMUST00000184720 137 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm8524-201ENSMUST00000186232 379 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm37689-201ENSMUST00000193139 275 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm37328-201ENSMUST00000193191 640 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm37349-201ENSMUST00000194205 624 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm43725-201ENSMUST00000200122 369 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm8479-201ENSMUST00000203825 718 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm3549-201ENSMUST00000203873 794 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm43926-201ENSMUST00000203978 430 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm17611-202ENSMUST00000220613 814 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm5446-201ENSMUST00000091762 784 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdc40Q9DC48 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdc40Q9DC48 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.46□□□□□ -1.37
Cdc40Q9DC48 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms