Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm22671-201ENSMUST00000104420 134 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm7129-201ENSMUST00000117402 997 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm13414-201ENSMUST00000117516 727 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm8812-201ENSMUST00000118496 412 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm13988-201ENSMUST00000119363 288 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm15362-201ENSMUST00000121459 388 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm28335-201ENSMUST00000186204 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm28558-201ENSMUST00000187373 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm28734-201ENSMUST00000188104 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm28968-201ENSMUST00000190413 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm38229-201ENSMUST00000191931 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm38121-201ENSMUST00000193213 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm37349-201ENSMUST00000194205 624 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm37991-201ENSMUST00000194297 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm38035-201ENSMUST00000194427 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm38350-201ENSMUST00000194789 696 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm44943-201ENSMUST00000207254 300 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 CU024892.1-201ENSMUST00000224869 515 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.55□□□□□ -1.2
Ddx56Q9D0R4 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm13878-201ENSMUST00000117986 577 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.54□□□□□ -1.2
Ddx56Q9D0R4 Gm23657-201ENSMUST00000122623 294 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms