Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm24385-201ENSMUST00000122694 350 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm11635-202ENSMUST00000139424 472 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm8711-201ENSMUST00000163114 883 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Mir466b-4-201ENSMUST00000178801 90 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm25285-201ENSMUST00000178951 90 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Mir466b-6-201ENSMUST00000180061 90 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Mir466c-2-201ENSMUST00000180211 90 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm2076-201ENSMUST00000182524 971 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm8183-201ENSMUST00000183134 980 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Mir6341-201ENSMUST00000183490 121 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm3454-201ENSMUST00000185571 412 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm17906-201ENSMUST00000202480 901 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm44225-201ENSMUST00000203582 186 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm7039-201ENSMUST00000205138 346 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm6227-201ENSMUST00000205237 421 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm45888-201ENSMUST00000212348 1229 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm19228-201ENSMUST00000214030 717 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 AC115750.1-201ENSMUST00000220441 567 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 AC122295.1-201ENSMUST00000223476 388 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Tyrobp-201ENSMUST00000032800 564 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm26111-201ENSMUST00000083969 106 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 1700028E10Rik-203ENSMUST00000201142 2310 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm26521-201ENSMUST00000181576 2215 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm14367-201ENSMUST00000119214 1497 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Gm38130-201ENSMUST00000194311 1761 ntBASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb3Q91XZ7 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Rorc-202ENSMUST00000197040 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm43523-201ENSMUST00000197397 2878 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Trim13-201ENSMUST00000039562 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm23659-201ENSMUST00000102245 110 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm11514-201ENSMUST00000117670 432 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm11322-201ENSMUST00000118095 435 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm9078-201ENSMUST00000119126 617 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm13711-201ENSMUST00000119708 453 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm13162-201ENSMUST00000121481 454 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm12133-201ENSMUST00000121775 661 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm12751-201ENSMUST00000122336 381 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm14349-201ENSMUST00000137155 902 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Hk1os-203ENSMUST00000143122 1218 ntTSL 2 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm22587-201ENSMUST00000157511 298 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm24298-201ENSMUST00000158299 60 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm22014-201ENSMUST00000158785 290 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Crb1-ps-201ENSMUST00000160441 895 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms