Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29476-201ENSMUST00000188397 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29505-201ENSMUST00000188424 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28125-201ENSMUST00000188470 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29391-201ENSMUST00000188545 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29280-201ENSMUST00000188571 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28349-201ENSMUST00000188590 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29652-201ENSMUST00000188622 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28819-206ENSMUST00000188816 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29079-201ENSMUST00000188875 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28443-201ENSMUST00000189081 698 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28213-201ENSMUST00000189183 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29382-201ENSMUST00000189549 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29377-205ENSMUST00000189603 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28327-201ENSMUST00000189638 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28790-201ENSMUST00000189642 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28907-201ENSMUST00000189700 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29586-207ENSMUST00000189745 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29115-201ENSMUST00000189870 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28366-201ENSMUST00000190147 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29212-201ENSMUST00000190384 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29533-201ENSMUST00000190403 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28162-201ENSMUST00000190545 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29030-201ENSMUST00000190848 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28742-201ENSMUST00000191001 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28899-201ENSMUST00000191161 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29567-201ENSMUST00000191188 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28222-201ENSMUST00000191210 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28776-201ENSMUST00000191282 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29306-201ENSMUST00000191366 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29618-201ENSMUST00000191423 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28136-210ENSMUST00000191432 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29251-201ENSMUST00000191480 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28658-201ENSMUST00000191532 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm32180-201ENSMUST00000192415 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm30598-201ENSMUST00000192620 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm37627-201ENSMUST00000194585 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm34274-201ENSMUST00000195825 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm9357-201ENSMUST00000207138 805 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC158142.3-201ENSMUST00000226230 675 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm5133-201ENSMUST00000118940 1255 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm15129-201ENSMUST00000119673 279 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm15316-201ENSMUST00000121082 421 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm15242-201ENSMUST00000122459 283 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm26025-201ENSMUST00000158655 271 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm9672-201ENSMUST00000166437 425 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm28439-201ENSMUST00000187714 876 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm8168-201ENSMUST00000209631 948 ntBASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.3□□□□□ -1.08
Brf1Q8CFK2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms