Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm14869-201ENSMUST00000119007 884 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm11498-201ENSMUST00000120660 949 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 BC064078-201ENSMUST00000122939 570 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm22948-201ENSMUST00000158561 243 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm25717-201ENSMUST00000158631 353 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm17212-201ENSMUST00000166666 259 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm6726-201ENSMUST00000172786 681 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Mir7084-201ENSMUST00000183876 70 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm27675-201ENSMUST00000184527 94 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm28546-201ENSMUST00000188221 615 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm21054-201ENSMUST00000203981 380 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44258-201ENSMUST00000204925 301 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44722-201ENSMUST00000206473 436 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm25498-201ENSMUST00000104424 129 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm15362-201ENSMUST00000121459 388 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm23139-201ENSMUST00000179454 132 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm8245-201ENSMUST00000182434 987 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm30517-201ENSMUST00000197350 772 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm42965-201ENSMUST00000201254 250 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm18484-201ENSMUST00000204389 991 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm46424-201ENSMUST00000221567 168 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms