Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm37493-201ENSMUST00000193167 433 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm19185-201ENSMUST00000196365 643 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Atg4aQ8C9S8 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm22256-201ENSMUST00000102291 107 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm24869-201ENSMUST00000104072 128 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm15153-201ENSMUST00000119867 274 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm7599-201ENSMUST00000121453 796 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm14612-201ENSMUST00000121522 881 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm25587-201ENSMUST00000082498 166 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.28□□□□□ -1.08
Atg4aQ8C9S8 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Atg4aQ8C9S8 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
Atg4aQ8C9S8 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Atg4aQ8C9S8 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Atg4aQ8C9S8 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Atg4aQ8C9S8 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm24473-201ENSMUST00000104483 131 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm13739-201ENSMUST00000118020 530 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm13754-201ENSMUST00000120486 998 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm24545-201ENSMUST00000158651 85 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm20614-201ENSMUST00000177106 632 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm21392-201ENSMUST00000182950 972 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm29240-201ENSMUST00000187248 286 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm17822-201ENSMUST00000204307 351 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm18559-201ENSMUST00000208249 604 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm46203-201ENSMUST00000218130 478 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Atg4aQ8C9S8 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms