Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sh3rf2Q8BZT2 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm42535-201ENSMUST00000197312 1399 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm12939-201ENSMUST00000117303 165 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm11501-201ENSMUST00000118039 581 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm5166-201ENSMUST00000121332 573 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm12778-201ENSMUST00000122341 333 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm24155-201ENSMUST00000175259 110 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm29141-201ENSMUST00000190357 882 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm8920-201ENSMUST00000196153 924 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm43141-201ENSMUST00000199695 274 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm6649-201ENSMUST00000199743 1165 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm43124-201ENSMUST00000201878 278 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm17834-201ENSMUST00000204322 891 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm7351-201ENSMUST00000210745 580 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm18040-201ENSMUST00000217922 827 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sh3rf2Q8BZT2 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.09□□□□□ -1.28
Sh3rf2Q8BZT2 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Sh3rf2Q8BZT2 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.09□□□□□ -1.28
Sh3rf2Q8BZT2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Sh3rf2Q8BZT2 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gm25724-201ENSMUST00000104531 117 ntBASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gm11796-201ENSMUST00000120208 972 ntBASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gm13237-201ENSMUST00000122151 635 ntBASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sh3rf2Q8BZT2 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms