Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm29784-201ENSMUST00000196217 406 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm43867-201ENSMUST00000203860 525 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm44845-201ENSMUST00000208773 335 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 AL929555.1-201ENSMUST00000215283 509 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm8607-201ENSMUST00000221864 431 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 AC107663.1-201ENSMUST00000224257 468 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 CT010453.2-201ENSMUST00000227005 483 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 AC152394.1-201ENSMUST00000227360 1086 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 AC165260.6-205ENSMUST00000224190 9762 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm45477-201ENSMUST00000200213 5498 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm9575-201ENSMUST00000122140 1339 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Usp40Q8BWR4 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm11609-201ENSMUST00000121926 793 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm16248-201ENSMUST00000124238 243 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm29464-201ENSMUST00000187692 513 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm37285-201ENSMUST00000194465 1139 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm45626-201ENSMUST00000210093 361 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm5928-201ENSMUST00000221839 466 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm272-201ENSMUST00000222073 919 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm18620-201ENSMUST00000222295 324 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm37465-201ENSMUST00000192845 3290 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm8177-201ENSMUST00000181591 1336 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp40Q8BWR4 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Usp40Q8BWR4 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Usp40Q8BWR4 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.52□□□□□ -0.88
Usp40Q8BWR4 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Usp40Q8BWR4 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC9.52□□□□□ -0.88
Usp40Q8BWR4 Gm5512-202ENSMUST00000220222 1522 ntBASIC9.52□□□□□ -0.88
Usp40Q8BWR4 AC111010.1-203ENSMUST00000227287 1548 ntBASIC9.52□□□□□ -0.88
Usp40Q8BWR4 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm4992-201ENSMUST00000120256 768 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm15061-201ENSMUST00000121076 1046 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Mir1900-201ENSMUST00000122714 78 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm17217-201ENSMUST00000166613 469 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm21392-201ENSMUST00000182950 972 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm37349-201ENSMUST00000194205 624 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm6077-201ENSMUST00000196008 499 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm19185-201ENSMUST00000196365 643 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm43576-201ENSMUST00000197937 871 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Ighv1-83-201ENSMUST00000199643 351 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms