Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm7831-201ENSMUST00000117990 552 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm15616-201ENSMUST00000118662 375 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm22948-201ENSMUST00000158561 243 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Mir8094-201ENSMUST00000183361 117 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm6610-201ENSMUST00000186324 358 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm43013-201ENSMUST00000198216 247 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm15500-201ENSMUST00000071523 894 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Chmp2bQ8BJF9 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Mir760-201ENSMUST00000103257 119 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm22470-201ENSMUST00000104117 130 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm14550-201ENSMUST00000117918 407 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Mir1907-201ENSMUST00000122509 90 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm22552-201ENSMUST00000157796 337 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm23139-201ENSMUST00000179454 132 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm18501-201ENSMUST00000185363 664 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm28975-201ENSMUST00000186412 686 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm37585-201ENSMUST00000195440 280 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp2bQ8BJF9 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms