Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm12262-201ENSMUST00000119915 305 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm22548-201ENSMUST00000174899 78 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21241-201ENSMUST00000179551 934 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm20819-201ENSMUST00000191091 925 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm20871-201ENSMUST00000191322 931 ntBASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Shank3Q4ACU6 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm45122-201ENSMUST00000206376 784 ntBASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm44919-201ENSMUST00000208587 1073 ntBASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Gm8256-203ENSMUST00000228692 591 ntBASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Shank3Q4ACU6 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.47□□□□□ -1.05
Shank3Q4ACU6 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms