Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.46□□□□□ -1.21
Shmt1P50431 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Shmt1P50431 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Shmt1P50431 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.46□□□□□ -1.21
Shmt1P50431 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.46□□□□□ -1.21
Shmt1P50431 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Shmt1P50431 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Shmt1P50431 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm25760-201ENSMUST00000103989 132 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm12788-201ENSMUST00000119090 308 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Mir1929-201ENSMUST00000158635 93 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Gm24680-201ENSMUST00000158759 126 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm28186-201ENSMUST00000187447 679 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Gm28443-201ENSMUST00000189081 698 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Gm8479-201ENSMUST00000203825 718 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm2221-201ENSMUST00000209342 418 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Shmt1P50431 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Shmt1P50431 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Shmt1P50431 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Shmt1P50431 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
Shmt1P50431 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Shmt1P50431 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.46□□□□□ -1.22
Shmt1P50431 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Shmt1P50431 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Shmt1P50431 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
Shmt1P50431 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm15161-201ENSMUST00000117340 387 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm12375-201ENSMUST00000119331 921 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm12105-201ENSMUST00000120846 779 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm6542-201ENSMUST00000153606 772 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm24682-201ENSMUST00000158764 137 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm17212-201ENSMUST00000166666 259 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm27178-201ENSMUST00000184962 340 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm28958-201ENSMUST00000185864 703 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm29240-201ENSMUST00000187248 286 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.45□□□□□ -1.22
Shmt1P50431 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm43396-201ENSMUST00000197506 706 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm18430-201ENSMUST00000197534 682 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm6590-201ENSMUST00000203343 687 ntBASIC7.45□□□□□ -1.22
Shmt1P50431 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.45□□□□□ -1.22
Shmt1P50431 Gm4585-201ENSMUST00000207218 452 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms