Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm17184-201ENSMUST00000111864 462 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Gm7785-201ENSMUST00000117121 892 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Gm11933-201ENSMUST00000121550 375 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Gm26023-201ENSMUST00000122722 313 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm24039-201ENSMUST00000157878 132 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm37929-201ENSMUST00000195116 493 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm44225-201ENSMUST00000203582 186 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Nedd8P29595 AC132384.1-201ENSMUST00000219908 1195 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC6.14□□□□□ -1.43
Nedd8P29595 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 AC142114.1-201ENSMUST00000227724 328 ntBASIC6.14□□□□□ -1.43
Nedd8P29595 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nedd8P29595 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nedd8P29595 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Nedd8P29595 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nedd8P29595 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nedd8P29595 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.14□□□□□ -1.43
Nedd8P29595 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nedd8P29595 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.13□□□□□ -1.43
Nedd8P29595 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nedd8P29595 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nedd8P29595 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nedd8P29595 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nedd8P29595 n-R5s51-201ENSMUST00000104473 123 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm26146-201ENSMUST00000104478 185 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Nedd8P29595 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm11689-201ENSMUST00000120766 302 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm17051-201ENSMUST00000170787 487 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm3585-201ENSMUST00000173438 875 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Nedd8P29595 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm28953-201ENSMUST00000188336 697 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm36928-201ENSMUST00000192466 694 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm37325-201ENSMUST00000194971 694 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm43310-201ENSMUST00000198975 820 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Gm42734-201ENSMUST00000201656 878 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.13□□□□□ -1.43
Nedd8P29595 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC6.13□□□□□ -1.43
Nedd8P29595 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.13□□□□□ -1.43
Nedd8P29595 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm5791-201ENSMUST00000220840 489 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.13□□□□□ -1.43
Nedd8P29595 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.13□□□□□ -1.43
Nedd8P29595 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nedd8P29595 Gm5590-201ENSMUST00000059110 345 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms