Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm14772-201ENSMUST00000116562 514 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm13176-201ENSMUST00000117910 477 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col2a1P28481 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm20691-201ENSMUST00000176889 333 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm37493-201ENSMUST00000193167 433 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm7769-201ENSMUST00000212900 933 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm9535-201ENSMUST00000218499 768 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm21731-201ENSMUST00000079524 489 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Col2a1P28481 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col2a1P28481 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm14796-201ENSMUST00000121216 959 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Gm2986-201ENSMUST00000121603 382 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Gm9064-201ENSMUST00000163579 566 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Gm11107-201ENSMUST00000165414 505 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Gm3344-201ENSMUST00000169610 603 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Mir7082-201ENSMUST00000183526 92 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Gm18447-201ENSMUST00000187501 307 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm37189-201ENSMUST00000192131 298 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.8□□□□□ -1.16
Col2a1P28481 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Col2a1P28481 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col2a1P28481 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col2a1P28481 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Col2a1P28481 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Col2a1P28481 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Col2a1P28481 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col2a1P28481 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col2a1P28481 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Col2a1P28481 Gm11799-201ENSMUST00000116110 460 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.79□□□□□ -1.16
Col2a1P28481 Gm15181-201ENSMUST00000120142 177 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms