Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm9451-201ENSMUST00000188491 604 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Gm28239-201ENSMUST00000190225 447 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Gm21577-201ENSMUST00000190823 697 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Gm37689-201ENSMUST00000193139 275 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.9□□□□□ -1.3
BdnfP21237 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BdnfP21237 Gm9240-201ENSMUST00000206527 742 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.9□□□□□ -1.3
BdnfP21237 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.9□□□□□ -1.3
BdnfP21237 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.9□□□□□ -1.3
BdnfP21237 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.9□□□□□ -1.3
BdnfP21237 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BdnfP21237 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
BdnfP21237 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BdnfP21237 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BdnfP21237 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.9□□□□□ -1.3
BdnfP21237 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Gm18719-201ENSMUST00000196696 1413 ntBASIC6.9□□□□□ -1.31
BdnfP21237 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
BdnfP21237 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
BdnfP21237 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
BdnfP21237 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
BdnfP21237 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BdnfP21237 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.89□□□□□ -1.31
BdnfP21237 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm12442-201ENSMUST00000118372 338 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm25178-201ENSMUST00000122633 325 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
BdnfP21237 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Mir1962-201ENSMUST00000157516 121 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm17091-201ENSMUST00000163248 357 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm21999-201ENSMUST00000165985 387 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm2951-201ENSMUST00000169447 490 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Gm25692-201ENSMUST00000175444 125 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm25082-201ENSMUST00000177296 255 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Gm7200-201ENSMUST00000188426 1163 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm36935-201ENSMUST00000192526 292 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm44356-201ENSMUST00000196731 111 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm18765-201ENSMUST00000203166 660 ntBASIC6.89□□□□□ -1.31
BdnfP21237 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm44809-201ENSMUST00000208305 993 ntBASIC6.89□□□□□ -1.31
BdnfP21237 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.89□□□□□ -1.31
BdnfP21237 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BdnfP21237 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Gm5250-201ENSMUST00000059065 321 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.89□□□□□ -1.31
BdnfP21237 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
BdnfP21237 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BdnfP21237 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BdnfP21237 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
BdnfP21237 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BdnfP21237 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BdnfP21237 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
BdnfP21237 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
BdnfP21237 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms