Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
P20040 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
P20040 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm18875-201ENSMUST00000188563 882 ntBASIC6.13□□□□□ -1.43
P20040 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.13□□□□□ -1.43
P20040 Gm28070-201ENSMUST00000191502 445 ntBASIC6.13□□□□□ -1.43
P20040 Gm37328-201ENSMUST00000193191 640 ntBASIC6.13□□□□□ -1.43
P20040 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.13□□□□□ -1.43
P20040 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.13□□□□□ -1.43
P20040 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm44252-201ENSMUST00000204187 330 ntBASIC6.13□□□□□ -1.43
P20040 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.13□□□□□ -1.43
P20040 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.13□□□□□ -1.43
P20040 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm5119-201ENSMUST00000215858 634 ntBASIC6.13□□□□□ -1.43
P20040 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.13□□□□□ -1.43
P20040 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
P20040 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.13□□□□□ -1.43
P20040 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.13□□□□□ -1.43
P20040 Gm9800-201ENSMUST00000052615 336 ntBASIC6.13□□□□□ -1.43
P20040 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
P20040 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
P20040 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm25189-201ENSMUST00000083911 164 ntBASIC6.13□□□□□ -1.43
P20040 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.13□□□□□ -1.43
P20040 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.13□□□□□ -1.43
P20040 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
P20040 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.13□□□□□ -1.43
P20040 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.13□□□□□ -1.43
P20040 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.13□□□□□ -1.43
P20040 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.13□□□□□ -1.43
P20040 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.13□□□□□ -1.43
P20040 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.12□□□□□ -1.43
P20040 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
P20040 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
P20040 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.12□□□□□ -1.43
P20040 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.12□□□□□ -1.43
P20040 Gm13744-201ENSMUST00000118953 850 ntBASIC6.12□□□□□ -1.43
P20040 Gm12944-201ENSMUST00000119262 463 ntBASIC6.12□□□□□ -1.43
P20040 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Gm10913-201ENSMUST00000133732 463 ntBASIC6.12□□□□□ -1.43
P20040 Gm2735-201ENSMUST00000136133 277 ntBASIC6.12□□□□□ -1.43
P20040 Gm24442-201ENSMUST00000157238 327 ntBASIC6.12□□□□□ -1.43
P20040 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm3208-201ENSMUST00000168281 427 ntBASIC6.12□□□□□ -1.43
P20040 Gm22702-201ENSMUST00000175372 69 ntBASIC6.12□□□□□ -1.43
P20040 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.12□□□□□ -1.43
P20040 Gm27684-201ENSMUST00000183778 80 ntBASIC6.12□□□□□ -1.43
P20040 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Gm28952-201ENSMUST00000189285 681 ntBASIC6.12□□□□□ -1.43
P20040 Gm29496-201ENSMUST00000189854 693 ntBASIC6.12□□□□□ -1.43
P20040 Gm8101-201ENSMUST00000192796 478 ntBASIC6.12□□□□□ -1.43
P20040 Gm36932-201ENSMUST00000195226 929 ntBASIC6.12□□□□□ -1.43
P20040 Gm37017-201ENSMUST00000195266 747 ntBASIC6.12□□□□□ -1.43
P20040 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm42464-202ENSMUST00000198111 774 ntBASIC6.12□□□□□ -1.43
P20040 Gm8539-201ENSMUST00000199822 501 ntBASIC6.12□□□□□ -1.43
P20040 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.12□□□□□ -1.43
P20040 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.12□□□□□ -1.43
P20040 Gm42673-201ENSMUST00000202676 337 ntBASIC6.12□□□□□ -1.43
P20040 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.12□□□□□ -1.43
P20040 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.12□□□□□ -1.43
P20040 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
P20040 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.12□□□□□ -1.43
P20040 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.12□□□□□ -1.43
P20040 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.12□□□□□ -1.43
P20040 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.12□□□□□ -1.43
P20040 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.12□□□□□ -1.43
P20040 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.12□□□□□ -1.43
P20040 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.12□□□□□ -1.43
P20040 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
P20040 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
P20040 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.12□□□□□ -1.43
P20040 Gm24924-201ENSMUST00000084007 164 ntBASIC6.12□□□□□ -1.43
P20040 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
P20040 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.12□□□□□ -1.43
P20040 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
P20040 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms