Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45283-201ENSMUST00000210593 628 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm33312-201ENSMUST00000222443 332 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm18621-201ENSMUST00000222677 679 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 AC163038.2-201ENSMUST00000224851 650 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 AC154640.1-204ENSMUST00000227105 648 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 AC130673.1-201ENSMUST00000227992 435 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm5341-201ENSMUST00000058881 489 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Sdc1P18828 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm45251-201ENSMUST00000209486 1465 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm13005-201ENSMUST00000119518 585 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm13222-201ENSMUST00000119638 138 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm4914-201ENSMUST00000119757 459 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm6081-201ENSMUST00000134472 489 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm25505-201ENSMUST00000157220 246 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm22882-201ENSMUST00000157749 124 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm24899-201ENSMUST00000158892 73 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm22690-201ENSMUST00000175054 110 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.52□□□□□ -1.53
Sdc1P18828 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28953-201ENSMUST00000188336 697 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm38203-201ENSMUST00000191815 245 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm36982-201ENSMUST00000193796 1128 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm42883-201ENSMUST00000202594 222 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sdc1P18828 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.52□□□□□ -1.53
Sdc1P18828 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.52□□□□□ -1.53
Sdc1P18828 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sdc1P18828 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms