Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm15149-201ENSMUST00000119370 360 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm3810-201ENSMUST00000122413 476 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm26346-201ENSMUST00000157525 329 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm25246-201ENSMUST00000175476 69 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm18700-201ENSMUST00000185791 553 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm37072-201ENSMUST00000194570 837 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm7492-201ENSMUST00000201745 725 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm18600-201ENSMUST00000207205 505 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Gm9315-201ENSMUST00000222696 908 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col1a1P11087 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col1a1P11087 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.09□□□□□ -1.11
Col1a1P11087 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col1a1P11087 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col1a1P11087 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Col1a1P11087 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
Col1a1P11087 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col1a1P11087 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Gm25717-201ENSMUST00000158631 353 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Gm25244-201ENSMUST00000178089 132 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Gm27152-201ENSMUST00000183828 99 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Gm28455-201ENSMUST00000189105 1290 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.08□□□□□ -1.12
Col1a1P11087 Gm43392-201ENSMUST00000196560 434 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Gm43850-201ENSMUST00000202021 578 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Gm45448-201ENSMUST00000211739 209 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 AC122290.1-201ENSMUST00000225631 1078 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col1a1P11087 Gm37785-201ENSMUST00000195783 2408 ntBASIC8.08□□□□□ -1.12
Col1a1P11087 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.08□□□□□ -1.12
Col1a1P11087 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Col1a1P11087 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col1a1P11087 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col1a1P11087 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.07□□□□□ -1.12
Col1a1P11087 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.07□□□□□ -1.12
Col1a1P11087 Gm12447-201ENSMUST00000119110 470 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Gm14695-201ENSMUST00000121721 282 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC8.07□□□□□ -1.12
Col1a1P11087 Gm22655-201ENSMUST00000174949 96 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Gm9658-201ENSMUST00000182757 1012 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Gm3351-201ENSMUST00000193454 505 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Gm5324-201ENSMUST00000208115 476 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Gm17950-201ENSMUST00000214617 646 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Col1a1P11087 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Col1a1P11087 Olfr519-201ENSMUST00000084752 960 ntBASIC8.07□□□□□ -1.12
Col1a1P11087 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
Col1a1P11087 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col1a1P11087 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col1a1P11087 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms