Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Ces2g-201ENSMUST00000043183 2859 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm37633-201ENSMUST00000192858 2700 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm43041-201ENSMUST00000200022 2630 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm38236-201ENSMUST00000192661 3229 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm24430-201ENSMUST00000104077 104 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm26012-201ENSMUST00000104411 128 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm12193-201ENSMUST00000117250 379 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm11189-201ENSMUST00000117979 375 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm15355-201ENSMUST00000118929 285 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm14991-201ENSMUST00000119913 598 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm3835-201ENSMUST00000120752 403 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm12983-201ENSMUST00000120974 310 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Iqcc-202ENSMUST00000121442 491 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm13555-201ENSMUST00000121668 319 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm8865-201ENSMUST00000125697 430 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm15534-201ENSMUST00000137642 562 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm23220-201ENSMUST00000158115 137 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm26040-201ENSMUST00000158147 161 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm24939-201ENSMUST00000158325 137 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm17068-201ENSMUST00000163135 980 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm8340-201ENSMUST00000165508 1191 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm7352-201ENSMUST00000167577 1192 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm20773-201ENSMUST00000178940 681 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28579-201ENSMUST00000186143 369 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm8367-201ENSMUST00000186145 887 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm18448-201ENSMUST00000186286 599 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28474-201ENSMUST00000188501 315 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm28788-201ENSMUST00000189717 375 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm29558-201ENSMUST00000190134 375 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Serpinc1-202ENSMUST00000191936 725 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm44058-201ENSMUST00000204335 467 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm45698-201ENSMUST00000208537 1135 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm36247-201ENSMUST00000211834 285 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.61□□□□□ -1.35
Hoxd3P09027 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm8394-201ENSMUST00000079684 952 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm6419-201ENSMUST00000097166 429 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Pex5l-205ENSMUST00000108225 3109 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Slc15a5-206ENSMUST00000171804 2461 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Scnn1a-203ENSMUST00000176110 3494 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Lipc-204ENSMUST00000216798 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.61□□□□□ -1.35
Hoxd3P09027 Tcaf1-203ENSMUST00000121083 3342 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms