Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm18892-201ENSMUST00000217628 881 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 AC131745.3-201ENSMUST00000223582 554 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 AC137117.3-201ENSMUST00000226265 485 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm7086-202ENSMUST00000228849 506 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm23358-201ENSMUST00000103887 110 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm24195-201ENSMUST00000116804 137 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm15422-201ENSMUST00000117453 541 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm13683-201ENSMUST00000119497 1076 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm11945-201ENSMUST00000120551 476 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm16523-201ENSMUST00000121253 592 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm11295-201ENSMUST00000121379 803 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm16471-201ENSMUST00000121940 618 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm12967-201ENSMUST00000122147 289 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm23082-201ENSMUST00000157852 133 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm23007-201ENSMUST00000158951 177 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm9027-201ENSMUST00000165914 661 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm10012-202ENSMUST00000170379 372 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm3611-201ENSMUST00000173687 877 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm8529-201ENSMUST00000183298 745 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm37689-201ENSMUST00000193139 275 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Pisrt1-201ENSMUST00000195532 515 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm43245-201ENSMUST00000197603 468 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm44282-201ENSMUST00000203199 190 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm18591-201ENSMUST00000220568 763 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm5668-201ENSMUST00000220897 436 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.7□□□□□ -1.34
Pcdh1F7BJK1 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms