Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm29784-201ENSMUST00000196217 406 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm18690-201ENSMUST00000204488 985 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm5654-201ENSMUST00000217787 475 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm6575-201ENSMUST00000222946 697 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Ephx2-202ENSMUST00000224698 1985 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm44745-201ENSMUST00000206563 2723 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm15311-201ENSMUST00000119682 282 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm15305-201ENSMUST00000120354 288 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm14070-201ENSMUST00000120773 428 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm15502-201ENSMUST00000121449 208 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm20432-201ENSMUST00000173716 250 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm27849-201ENSMUST00000183673 125 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm37920-201ENSMUST00000192952 749 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm7492-201ENSMUST00000201745 725 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 AC122533.1-201ENSMUST00000225177 767 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm5386-201ENSMUST00000121749 2450 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm12183-201ENSMUST00000120566 1848 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm14712-201ENSMUST00000120195 772 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm15242-201ENSMUST00000122459 283 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm25246-201ENSMUST00000175476 69 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm27152-201ENSMUST00000183828 99 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm28846-201ENSMUST00000189161 368 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm7252-201ENSMUST00000223284 456 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Gm22126-201ENSMUST00000083244 142 ntBASIC5.85□□□□□ -1.47
Col6a4A2AX52 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col6a4A2AX52 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col6a4A2AX52 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col6a4A2AX52 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms