Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm24442-201ENSMUST00000157238 327 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Mir7084-201ENSMUST00000183876 70 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm28952-201ENSMUST00000189285 681 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm8101-201ENSMUST00000192796 478 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm43147-201ENSMUST00000196944 542 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm45497-201ENSMUST00000211701 740 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm36758-201ENSMUST00000222594 310 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm15105-201ENSMUST00000117777 204 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm8812-201ENSMUST00000118496 412 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm8421-201ENSMUST00000119439 305 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm15007-201ENSMUST00000119982 710 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm11726-201ENSMUST00000121028 424 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm15188-201ENSMUST00000121264 704 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm16330-201ENSMUST00000128324 297 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm20614-201ENSMUST00000177106 632 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Mir6357-201ENSMUST00000184246 104 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm29354-201ENSMUST00000187613 696 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm29214-201ENSMUST00000190216 570 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm18960-201ENSMUST00000222962 713 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm2840-201ENSMUST00000048361 411 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Trim3Q9R1R2 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms