Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm24157-201ENSMUST00000175265 111 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm28941-201ENSMUST00000185536 1017 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp2aQ9DB34 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm6142-201ENSMUST00000120290 325 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm16284-201ENSMUST00000140995 400 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm22533-201ENSMUST00000158821 274 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm16113-201ENSMUST00000159629 372 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm24756-201ENSMUST00000177002 96 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm27185-201ENSMUST00000184296 247 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Mir7058-201ENSMUST00000184637 75 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm36935-201ENSMUST00000192526 292 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm42782-201ENSMUST00000197286 522 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.18□□□□□ -1.26
Chmp2aQ9DB34 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm13423-201ENSMUST00000117205 888 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm14729-201ENSMUST00000118373 689 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm14631-201ENSMUST00000119067 594 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm15316-201ENSMUST00000121082 421 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm6451-201ENSMUST00000121488 717 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm16248-201ENSMUST00000124238 243 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm5119-201ENSMUST00000215858 634 ntBASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.17□□□□□ -1.26
Chmp2aQ9DB34 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms