Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Pfdn1Q9CWM4 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pfdn1Q9CWM4 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pfdn1Q9CWM4 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pfdn1Q9CWM4 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pfdn1Q9CWM4 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.86□□□□□ -1.47
Pfdn1Q9CWM4 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm23659-201ENSMUST00000102245 110 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm14056-201ENSMUST00000117198 642 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gng5-ps-201ENSMUST00000120931 205 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm10913-201ENSMUST00000133732 463 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm3142-201ENSMUST00000190107 414 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm4322-201ENSMUST00000191094 336 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm43103-201ENSMUST00000199021 802 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm44192-201ENSMUST00000204195 556 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm2981-201ENSMUST00000213947 694 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm35412-201ENSMUST00000220437 999 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 AC154522.1-201ENSMUST00000224647 1903 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pfdn1Q9CWM4 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm45657-201ENSMUST00000211318 1349 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm24542-201ENSMUST00000103870 110 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm11765-201ENSMUST00000121173 1205 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm16248-201ENSMUST00000124238 243 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm26323-201ENSMUST00000157743 175 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm4868-201ENSMUST00000164138 789 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm23639-201ENSMUST00000175078 132 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm25692-201ENSMUST00000175444 125 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm5435-201ENSMUST00000179295 1150 ntBASIC5.84□□□□□ -1.47
Pfdn1Q9CWM4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms