Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mir135b-201ENSMUST00000083501 97 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm16391-201ENSMUST00000086601 447 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm15422-201ENSMUST00000117453 541 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm13702-201ENSMUST00000118542 825 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm16056-201ENSMUST00000119293 135 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm12599-201ENSMUST00000120534 792 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm15079-201ENSMUST00000121943 216 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm25845-201ENSMUST00000122588 310 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm23117-201ENSMUST00000158482 108 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm24576-201ENSMUST00000175508 248 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm5445-201ENSMUST00000180224 480 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Mir6403-201ENSMUST00000185007 129 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm10416-201ENSMUST00000197379 645 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 AC154198.1-201ENSMUST00000222839 424 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 AC156574.2-201ENSMUST00000228023 282 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim11Q99PQ2 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm5754-201ENSMUST00000118774 892 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Trim11Q99PQ2 Gm14463-201ENSMUST00000121117 498 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms