Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm25273-201ENSMUST00000104295 115 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm26014-201ENSMUST00000104405 132 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm24071-201ENSMUST00000104520 132 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm16418-201ENSMUST00000118577 171 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm13858-201ENSMUST00000118862 671 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm15836-201ENSMUST00000119952 793 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm14202-201ENSMUST00000120121 311 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm7113-201ENSMUST00000120477 958 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm8089-201ENSMUST00000122463 968 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm11107-201ENSMUST00000165414 505 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Mir3072-201ENSMUST00000175610 83 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm20778-201ENSMUST00000178524 627 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Mir7011-201ENSMUST00000183768 73 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm27972-201ENSMUST00000184720 137 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm42932-201ENSMUST00000197280 744 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm26413-202ENSMUST00000198972 127 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm43725-201ENSMUST00000200122 369 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm42734-201ENSMUST00000201656 878 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm5586-201ENSMUST00000206264 795 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm4259-201ENSMUST00000206489 758 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC153544.1-201ENSMUST00000217988 400 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC168059.2-201ENSMUST00000224473 333 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm22971-201ENSMUST00000083305 97 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm16391-201ENSMUST00000086601 447 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm37470-201ENSMUST00000193378 2798 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm13590-201ENSMUST00000120183 1588 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.08□□□□□ -1.28
Trim8Q99PJ2 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Mir1192-201ENSMUST00000116976 121 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Mir669e-201ENSMUST00000117003 119 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm6181-201ENSMUST00000117187 264 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm6654-201ENSMUST00000118950 348 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm3931-201ENSMUST00000119038 455 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm12123-201ENSMUST00000120348 472 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm14739-201ENSMUST00000120424 802 ntBASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim8Q99PJ2 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms