Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm15531-201ENSMUST00000118062 252 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm44361-201ENSMUST00000197960 94 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm17950-201ENSMUST00000214617 646 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 AC153955.4-201ENSMUST00000217069 2752 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm11105-201ENSMUST00000112781 478 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm23408-201ENSMUST00000158523 265 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm21772-201ENSMUST00000169213 478 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm17126-201ENSMUST00000172276 523 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Mir6417-201ENSMUST00000183815 116 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm18728-201ENSMUST00000186155 753 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm25587-201ENSMUST00000082498 166 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm13245-201ENSMUST00000119646 260 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm23250-201ENSMUST00000157444 267 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Gm37784-201ENSMUST00000193233 189 ntBASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cdh23Q99PF4 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm12734-201ENSMUST00000120228 948 ntBASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm17142-201ENSMUST00000164933 645 ntBASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm15732-201ENSMUST00000079794 480 ntBASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdh23Q99PF4 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms