Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.74□□□□□ -1.33
Cstf3Q99LI7 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.74□□□□□ -1.33
Cstf3Q99LI7 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cstf3Q99LI7 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Mir697-201ENSMUST00000102316 109 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Mir760-201ENSMUST00000103257 119 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm7091-201ENSMUST00000116438 586 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm7129-201ENSMUST00000117402 997 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm15739-201ENSMUST00000118049 872 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm8421-201ENSMUST00000119439 305 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm15362-201ENSMUST00000121459 388 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm15096-201ENSMUST00000121918 878 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm25277-201ENSMUST00000157266 324 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm26182-201ENSMUST00000157688 116 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm24923-201ENSMUST00000178201 88 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm27019-201ENSMUST00000183056 404 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm6197-201ENSMUST00000192273 454 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm6885-201ENSMUST00000217261 372 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm46231-201ENSMUST00000220152 314 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm5080-201ENSMUST00000220341 743 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf3Q99LI7 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm23485-201ENSMUST00000104181 155 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm13137-201ENSMUST00000118035 345 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm11865-201ENSMUST00000118093 859 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms