Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm9506-201ENSMUST00000118516 320 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm13930-201ENSMUST00000118569 368 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm12535-201ENSMUST00000121025 484 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm18595-201ENSMUST00000175736 1068 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm21301-201ENSMUST00000189476 699 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm9652-201ENSMUST00000209345 163 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm22053-201ENSMUST00000083394 200 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm24411-201ENSMUST00000083428 131 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm5446-201ENSMUST00000091762 784 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Brf1Q8CFK2 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm14865-201ENSMUST00000117523 494 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm11581-201ENSMUST00000122024 763 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm27001-201ENSMUST00000182252 936 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29048-201ENSMUST00000185342 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29403-201ENSMUST00000185491 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28234-201ENSMUST00000185657 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28248-201ENSMUST00000186093 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29633-202ENSMUST00000186217 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28829-201ENSMUST00000186231 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28261-201ENSMUST00000186417 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28815-201ENSMUST00000186751 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28608-201ENSMUST00000186860 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28122-201ENSMUST00000187088 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28420-201ENSMUST00000187340 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28186-201ENSMUST00000187447 679 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28106-201ENSMUST00000187640 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm28698-201ENSMUST00000187734 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29224-201ENSMUST00000187965 615 ntBASIC8.31□□□□□ -1.08
Brf1Q8CFK2 Gm29189-201ENSMUST00000188018 615 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 230.2 ms