Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm22149-202ENSMUST00000196259 137 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm24826-202ENSMUST00000197298 216 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 A1cf-203ENSMUST00000224400 1204 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm5528-201ENSMUST00000076314 480 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.77□□□□□ -1.16
Ccdc38Q8CDN8 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
Ccdc38Q8CDN8 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Mir697-201ENSMUST00000102316 109 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm15739-201ENSMUST00000118049 872 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm10086-201ENSMUST00000136334 354 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Mir7084-201ENSMUST00000183876 70 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Mir378d-201ENSMUST00000184232 110 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm46231-201ENSMUST00000220152 314 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm35638-201ENSMUST00000220724 652 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm10540-201ENSMUST00000097581 276 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.77□□□□□ -1.17
Ccdc38Q8CDN8 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm7129-201ENSMUST00000117402 997 ntBASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm12331-201ENSMUST00000119927 622 ntBASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm9697-201ENSMUST00000147052 997 ntBASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.76□□□□□ -1.17
Ccdc38Q8CDN8 Gm24923-201ENSMUST00000178201 88 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms