Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm12713-201ENSMUST00000118404 764 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm8421-201ENSMUST00000119439 305 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm14787-201ENSMUST00000121236 388 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm25178-201ENSMUST00000122633 325 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm22024-201ENSMUST00000122733 287 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm3585-201ENSMUST00000173438 875 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm5272-201ENSMUST00000182730 982 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm27178-201ENSMUST00000184962 340 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm7891-201ENSMUST00000190284 843 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm7412-201ENSMUST00000191692 605 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm37322-201ENSMUST00000193409 337 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm37526-201ENSMUST00000194640 619 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm4525-201ENSMUST00000198831 254 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm3549-201ENSMUST00000203873 794 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm5154-201ENSMUST00000203971 399 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 AC154618.2-201ENSMUST00000228299 452 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Gm9519-201ENSMUST00000206108 1337 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Vps53Q8CCB4 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm6181-201ENSMUST00000117187 264 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm13423-201ENSMUST00000117205 888 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm12321-201ENSMUST00000121485 804 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm15644-201ENSMUST00000121764 387 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm12754-201ENSMUST00000121908 454 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm8988-201ENSMUST00000155015 1240 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm34272-201ENSMUST00000208886 253 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm17611-202ENSMUST00000220613 814 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Vps53Q8CCB4 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.18□□□□□ -1.1
Vps53Q8CCB4 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms