Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 AC115746.1-201ENSMUST00000228949 3617 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm38097-201ENSMUST00000192936 439 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm19185-201ENSMUST00000196365 643 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm7252-201ENSMUST00000223284 456 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm45746-201ENSMUST00000212623 2447 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm27299-201ENSMUST00000184593 103 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm28918-201ENSMUST00000188822 699 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm5324-201ENSMUST00000208115 476 ntBASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Col6a6Q8C6K9 Gm12438-201ENSMUST00000122034 336 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm35108-201ENSMUST00000194321 699 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm33191-201ENSMUST00000195604 699 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm45448-201ENSMUST00000211739 209 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm44950-201ENSMUST00000206403 2296 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm7113-201ENSMUST00000120477 958 ntBASIC6.25□□□□□ -1.41
Col6a6Q8C6K9 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms