Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm12123-201ENSMUST00000120348 472 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm11809-201ENSMUST00000120923 950 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm23533-201ENSMUST00000157540 245 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm21742-201ENSMUST00000189352 548 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm29138-201ENSMUST00000191444 348 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm7299-201ENSMUST00000194441 581 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm44404-201ENSMUST00000203979 636 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm29977-201ENSMUST00000206804 724 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm18378-201ENSMUST00000216245 628 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm18960-201ENSMUST00000222962 713 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm9801-201ENSMUST00000054860 408 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm6776-201ENSMUST00000057752 900 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Trim47Q8C0E3 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm12773-201ENSMUST00000120134 587 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm24647-201ENSMUST00000157112 113 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm20452-201ENSMUST00000174686 513 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm21894-201ENSMUST00000179631 546 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm28614-201ENSMUST00000186483 458 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm7200-201ENSMUST00000188426 1163 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm18131-201ENSMUST00000199241 449 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm44245-201ENSMUST00000204304 232 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm44705-201ENSMUST00000206719 339 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm45888-201ENSMUST00000212348 1229 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 AC122290.1-201ENSMUST00000225631 1078 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm6054-201ENSMUST00000078052 378 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm43528-201ENSMUST00000199492 1674 ntBASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms