Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm16373-201ENSMUST00000129517 303 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm26022-201ENSMUST00000158663 108 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm8203-201ENSMUST00000173192 387 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Hnrnpk-221ENSMUST00000177497 2585 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm5266-201ENSMUST00000187302 1162 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 AC160031.2-201ENSMUST00000218242 274 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm18972-201ENSMUST00000218873 630 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm5951-201ENSMUST00000220283 504 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 AC154636.2-201ENSMUST00000222538 161 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Mak-205ENSMUST00000224740 2354 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Trim35Q8C006 AC116596.1-201ENSMUST00000228112 1762 ntBASIC9.69□□□□□ -0.86
Trim35Q8C006 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Smim7-203ENSMUST00000167290 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trim35Q8C006 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trim35Q8C006 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gpr171-201ENSMUST00000085040 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 AL662807.2-201ENSMUST00000224024 3335 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Prpf31-201ENSMUST00000008517 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm7356-201ENSMUST00000186636 1527 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm7358-201ENSMUST00000189454 1527 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Kdm4a-203ENSMUST00000106403 4536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm45757-201ENSMUST00000211835 1480 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm28557-203ENSMUST00000186303 3886 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trim35Q8C006 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm24066-201ENSMUST00000104515 131 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm12700-201ENSMUST00000118145 457 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm14841-201ENSMUST00000121067 758 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm1947-201ENSMUST00000122451 910 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm8464-202ENSMUST00000146697 1142 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm4750-201ENSMUST00000151942 1142 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm26349-201ENSMUST00000157530 130 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm15838-201ENSMUST00000161575 180 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm5983-201ENSMUST00000197739 770 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm4754-201ENSMUST00000201337 809 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm45032-201ENSMUST00000205375 520 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 4933400L20Rik-202ENSMUST00000211119 870 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim35Q8C006 AC153924.1-201ENSMUST00000220117 312 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm16335-201ENSMUST00000077495 309 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm9234-201ENSMUST00000077747 492 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC9.68□□□□□ -0.86
Trim35Q8C006 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim35Q8C006 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms