Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm29486-201ENSMUST00000088648 372 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm44194-201ENSMUST00000204222 3229 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 AC124516.2-201ENSMUST00000221455 1829 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm25877-201ENSMUST00000104326 129 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm24473-201ENSMUST00000104483 131 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm22990-201ENSMUST00000175427 89 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm5345-201ENSMUST00000183076 1014 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm8524-201ENSMUST00000186232 379 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm9504-201ENSMUST00000196322 468 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm9367-201ENSMUST00000205703 546 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm45122-201ENSMUST00000206376 784 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm9240-201ENSMUST00000206527 742 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm44833-201ENSMUST00000208368 331 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm32983-201ENSMUST00000208500 505 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Gm18040-201ENSMUST00000217922 827 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Usp47Q8BY87 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Usp47Q8BY87 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 AC122828.2-201ENSMUST00000222511 2880 ntBASIC9.72□□□□□ -0.85
Usp47Q8BY87 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp47Q8BY87 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Usp47Q8BY87 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm16073-201ENSMUST00000116032 517 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm15158-201ENSMUST00000120577 570 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm19088-201ENSMUST00000198800 566 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm44111-201ENSMUST00000204649 399 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm18789-201ENSMUST00000216115 550 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 AC131795.1-201ENSMUST00000219632 426 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm6575-201ENSMUST00000222946 697 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm18955-201ENSMUST00000223173 649 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm14896-201ENSMUST00000121311 1351 ntBASIC9.71□□□□□ -0.86
Usp47Q8BY87 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.86
Usp47Q8BY87 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm9226-201ENSMUST00000188352 3489 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm24790-201ENSMUST00000104285 132 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm5319-201ENSMUST00000118965 873 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm12447-201ENSMUST00000119110 470 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm22552-201ENSMUST00000157796 337 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Usp47Q8BY87 Gm20615-201ENSMUST00000177503 705 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 AC122844.1-201ENSMUST00000195971 107 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.7□□□□□ -0.86
Usp47Q8BY87 n-R5s95-201ENSMUST00000082684 118 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms