Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Gm37140-201ENSMUST00000192914 1684 ntBASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Prpf38bQ80SY5 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Mir669l-201ENSMUST00000103771 98 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm12944-201ENSMUST00000119262 463 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm11385-201ENSMUST00000121513 570 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm13024-201ENSMUST00000121756 718 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm24682-201ENSMUST00000158764 137 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm8550-201ENSMUST00000161621 653 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Adgrg4-206ENSMUST00000168724 531 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Mir8095-201ENSMUST00000185103 129 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm18382-201ENSMUST00000194394 582 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm9652-201ENSMUST00000209345 163 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm35619-201ENSMUST00000222548 600 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.19□□□□□ -1.1
Prpf38bQ80SY5 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm6982-201ENSMUST00000118752 1560 ntBASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm12365-201ENSMUST00000117931 568 ntBASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm25669-201ENSMUST00000157699 112 ntBASIC8.18□□□□□ -1.1
Prpf38bQ80SY5 Gm23317-201ENSMUST00000157999 129 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms