Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15732-201ENSMUST00000079794 480 ntBASIC8.06□□□□□ -1.12
Nup98Q6PFD9 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Nup98Q6PFD9 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm9064-201ENSMUST00000163579 566 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm29197-201ENSMUST00000185922 702 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Ighv1-83-201ENSMUST00000199643 351 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm35619-201ENSMUST00000222548 600 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Nup98Q6PFD9 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm37255-201ENSMUST00000193302 3060 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm43235-201ENSMUST00000200121 297 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm18879-201ENSMUST00000221187 1537 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup98Q6PFD9 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm24069-201ENSMUST00000104512 127 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm11256-201ENSMUST00000118109 829 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm15696-201ENSMUST00000121730 445 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm12518-201ENSMUST00000122075 779 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm19087-201ENSMUST00000191430 946 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Ighv1-14-201ENSMUST00000194015 402 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm43576-201ENSMUST00000197937 871 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm43233-201ENSMUST00000200491 616 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Gm5080-201ENSMUST00000220341 743 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Nup98Q6PFD9 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms