Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp49Q6P9L4 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm11689-201ENSMUST00000120766 302 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm17217-201ENSMUST00000166613 469 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm25640-201ENSMUST00000175378 125 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm9167-201ENSMUST00000182469 962 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm27014-201ENSMUST00000182658 937 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm28580-201ENSMUST00000186767 88 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm29470-201ENSMUST00000188007 696 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm21301-201ENSMUST00000189476 699 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm7891-201ENSMUST00000190284 843 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm43906-201ENSMUST00000203194 906 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm45276-201ENSMUST00000209549 1086 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 CT009764.1-201ENSMUST00000222260 483 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp49Q6P9L4 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp49Q6P9L4 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp49Q6P9L4 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp49Q6P9L4 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp49Q6P9L4 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Usp49Q6P9L4 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp49Q6P9L4 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm12903-201ENSMUST00000121015 544 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm7599-201ENSMUST00000121453 796 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm6451-201ENSMUST00000121488 717 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm25969-201ENSMUST00000157166 132 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm18875-201ENSMUST00000188563 882 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm19175-201ENSMUST00000199895 916 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 AC157212.1-201ENSMUST00000228398 1075 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp49Q6P9L4 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms